Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901980.1_cds_XP_016452018.1_46302
CDS Infomation

[gene=LOC107776618] [db_xref=GeneID:107776618] [protein=protein IQ-DOMAIN 31-like] [protein_id=XP_016452018.1] [location=complement(join(122551..122582,123144..124164,124470..124550,124762..124962,126465..126743,127297..127371))] [gbkey=CDS]
Sequence

ATGGGAAAATCTCCTGGAAAATGGTTCAGGTCTTTGCTGGCAGGGAGAAAGTCTTCCAAA
TCTAGCACATCAAAAAAATCTTCAAATGAGAAAGCATCAGTAATTTCCACCAACGCGGCA
TTATCTGGTTTGTCTGCCCCTCCGCCTTTGATATCTGAGTCAGTTGCTGGTAGTGGTGGA
ATAAAAGAGGACTCAAACCTTGATAAAGGAGGGTTCACTGATGAGGTGAGTCTCCCTTCT
ATGAAGCAAGATGAAGATGAACAAAATACATGTCTTACCTTACCCGAGGATACTGAGAAA
ATGAGGCTTGAGGAAGCTGCTATGAAGATGCAAGCTATTTTTAGGGGTTATCTGGCTCGT
CGAGCATTTTTTAGGCTCAAGGGCGTCATAAGGCTACAAGCTGCCATACGCGGCCATCTG
GTCAGAAGGCAGGCTGTTGCCACATTATACTGCATACATGGCATTGTCAAGCTTCAAGCA
CATGCACGTGGCCAGATTGTTAGGCGTTCCAGTATTGGCTGTGAAGTGATAACCAAACGA
GGACTTGGACAACAGGATGCCAAACAATTGGAGTATCAAAGAAATAATGCATCCAAACTA
GCACAAGAGCTATCCAAGAATGAGTTCACTACAAAGCTACTTGGTTCATCACCTACTGTA
ATGCCTCTACGCCTCCAATATGGTCCAGAGGAACCAAATTCTAGTCAGGAATGGTTAGTC
CGCTGGACTTTATCACATATTTGGCGACCACGGTCCAAACTGAAAATGCTTTCAAAAACA
AAGCATAAAAAAGTTGAAGCAGACATGGCTACGTCAAAGCACAATGGACGGAAAGTGCTT
TCTAGAAAGACGCAGAATGGTTCAAATCATTCCATTTCGGGGTCAGAAAAGAAGAAATCA
AGTCCTTTAGTAAACTCTGTTCTTCAGAATCCAGGAAGTGAGATAAAGAAAGTAAAGCAT
AATTTAAAGAAAATGTCCAGCCCTATATTGGAAAAGCCTGTTCAGTCTGAGGCTGACTCT
GAGAGGAAAAGGCTAAATCATGACACAACATCAACTATTCTAGTTCCTGAGGGGAGCATG
ACATCTGGCGAACTGTTTAAAAGATTAGAAGGGACAACAGAAAATTCTACTAATGTGGAG
ACACCTCCAGAAACACTAGTGATGGATAATACTATCACTCATTTGGATTGCCTTTCTGTA
TCTGATAAGCATCAGAAATCAATTTCTGATGCTGTTGATAGTTTTTCTCCATCTGATATG
CATCAGAAATTGATCACTGATAACAGAGAGGATATTCCTGTTGCAAATGACAATTCTTGC
ACTAACCATGATAATGAAGGAAATGAGAGTAACATGACTGACAGAAGAGTTTCTTTACCT
GCAAAGCATGATGTAGATGCAGGTACGCCAACGGCAAGAAAGGTGCCCAGCTATATGGCT
CCAACCAAGTCAGCTAAGGCTAAGTTGAAAGAGCAAGCCTCACCAAGGTTTGGGCAAGAT
GTGTCCGAGAAGAATGCCCTAAGTAGACGTCATTCTTTGCCATCCCCTATGAATGGCAAG
CTGAGTTCATCGCCGCGGGTGCAGAGGCTGGTCCAAGCTAGTGCAAAAGAAGGAATCAAG
ATTGATAGATCTTTATCATCTTCAAGGGATGGTACTGATAAGATAACTCGAGCAGAATGG
AAGCGGTAA

Peptide Sequence

PEP ID

XP_016452018.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tabacum]
Sequence

MGKSPGKWFRSLLAGRKSSKSSTSKKSSNEKASVISTNAALSGLSAPPPLISESVAGSGG
IKEDSNLDKGGFTDEVSLPSMKQDEDEQNTCLTLPEDTEKMRLEEAAMKMQAIFRGYLAR
RAFFRLKGVIRLQAAIRGHLVRRQAVATLYCIHGIVKLQAHARGQIVRRSSIGCEVITKR
GLGQQDAKQLEYQRNNASKLAQELSKNEFTTKLLGSSPTVMPLRLQYGPEEPNSSQEWLV
RWTLSHIWRPRSKLKMLSKTKHKKVEADMATSKHNGRKVLSRKTQNGSNHSISGSEKKKS
SPLVNSVLQNPGSEIKKVKHNLKKMSSPILEKPVQSEADSERKRLNHDTTSTILVPEGSM
TSGELFKRLEGTTENSTNVETPPETLVMDNTITHLDCLSVSDKHQKSISDAVDSFSPSDM
HQKLITDNREDIPVANDNSCTNHDNEGNESNMTDRRVSLPAKHDVDAGTPTARKVPSYMA
PTKSAKAKLKEQASPRFGQDVSEKNALSRRHSLPSPMNGKLSSSPRVQRLVQASAKEGIK
IDRSLSSSRDGTDKITRAEWKR

Transcript Sequence

Gene sequence data has not been registered.